Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015952386.1_cds_XP_016492069.1_82318
CDS Infomation

[gene=LOC107811614] [db_xref=GeneID:107811614] [protein=calcium-dependent protein kinase 29-like] [protein_id=XP_016492069.1] [location=complement(join(9453..9539,9641..9740,11878..12005,12706..12873,12954..13069,13163..13315,14028..14171,16610..17375))] [gbkey=CDS]
Sequence

ATGGGACTTTGTTTCACTAAAGACTCTTGCTTTACAAAGTCTAGAGATGTTCCAATATCA
TCATCTCCTCCTTATCAATCTCCTGAATATCATCCAATACCTGTATTATCTCAAAAACAT
CGCGACGAATCACCATCACCTCCAACTCCAGCTCCAGCACCAACACCAGCACCAGCACCA
GCACCAGCACCAAAGCCGATTACAGCTTTCAATCCTAAGCCAAGAACTAGTATTTCCCTA
CCATCATCTTCTCAAATAGGTCCAATTTTAGGCAAGCCATATATTGACATTACTACAATA
TATGATCTTGACAAAGAATTGGGCAGGGGTCAATTTGGTATTACATATCTCTGTACTGAT
AAAATAACTGGATTGAAATATGCATGTAAGTCCATTTCAAGAAGGAAGTTGGTAAGTTCA
AAGGATATAGAAGATGTTAGGAGGGAAATTACTATACTTCAATATTTAAGTGGACAACCA
AATATTGTAGAGTTTAAAGGTGCATATGAGGATAGACATAATCTGCATTTGGTTATGGAA
TTATGCTCAGGTGGTGAACTTTTTGATCGTATTACTGCTAAAGGAAATTATTCAGAGAAA
GAAGCTGCTAGAATTGGAAGGCAAATTGTGAATGTGGTTCATGTTTGTCATTTTATGGGA
GTTATGCATAGAGACCTTAAACCTGAAAACTTTTTGATGGTTAGTAAAGATGATGATTCT
CCATTAAAGGCCACTGATTTTGGTCTATCTGTCTTCATTGAGGAAGGAAAAATTTACAAG
GATATAGTTGGAAGTGCATATTATGTGGCACCTGAGGTATTGAAGCGCAAATATGGGAAA
GAAATAGATGTGTGGAGTGCTGGAGTTATTTTATACATTCTATTAAGTGGATTTCCTCCT
TTCTGGGCTGAGACTGAAAAAGGCATATTTGAAGAGATTCTTAAAGGCCAACTTGATTTT
GAATCCTCTCCTTGGCCTTCTATCTCTTCCTCTGCAAAGGATCTTGTTAGAAAAATGTTG
ACAATAAATCCTACAAAAAGGATCACTGCAGATGCAGCCCTCGAACATCCATGGCTCAAG
AAAGACGGCGAAGCATCGGACAAGCCTATTGATAGTGCTGTTTTGATTAGGCTAAAGCAA
TTCAGAGCAAGTAACAAGATGAAGAAGCTTGCTCTTAAGGTTATTGCAGAAAATTTATCA
GAAGAAGAAATCAAGGGATTGAAGCAGATGTTCAATAACATGGATACTGATGGAAGTGGT
ACAATCACATATGAAGAACTTAAAACAGGATTGTCTAGGCTAGGTTCCAAGCTCACTGAA
ACTGAAATAAAACAGCTAATGGATGCAGCAGATGTTGATAATAGTGGGACTATAGACTAC
ATTGAGTTCATTACTGCTACTATGCATCGACACAAACTTGAAAGAGAAGAAAACTTGTAT
AAGGCTTTCCAGTTTTTTGACAAGGATAATAGTGGATTTATTACAAGAGATGAACTAAGA
CATGCTATGTCAGAATATGGAATGGGGGATGAAGCTACAATAGATGAAATCCTAGATGAT
GTTGATACAAATAAAGATGGCCTAATTAACTACGAGGAATTTGTAGCGATGATGAGAAGA
GGAATTGTTGATGATCATGGAGGGAAACTAAGAGAAAATTGA

Peptide Sequence

PEP ID

XP_016492069.1
PEP Infomation

PREDICTED: calcium-dependent protein kinase 29-like [Nicotiana tabacum]
Sequence

MGLCFTKDSCFTKSRDVPISSSPPYQSPEYHPIPVLSQKHRDESPSPPTPAPAPTPAPAP
APAPKPITAFNPKPRTSISLPSSSQIGPILGKPYIDITTIYDLDKELGRGQFGITYLCTD
KITGLKYACKSISRRKLVSSKDIEDVRREITILQYLSGQPNIVEFKGAYEDRHNLHLVME
LCSGGELFDRITAKGNYSEKEAARIGRQIVNVVHVCHFMGVMHRDLKPENFLMVSKDDDS
PLKATDFGLSVFIEEGKIYKDIVGSAYYVAPEVLKRKYGKEIDVWSAGVILYILLSGFPP
FWAETEKGIFEEILKGQLDFESSPWPSISSSAKDLVRKMLTINPTKRITADAALEHPWLK
KDGEASDKPIDSAVLIRLKQFRASNKMKKLALKVIAENLSEEEIKGLKQMFNNMDTDGSG
TITYEELKTGLSRLGSKLTETEIKQLMDAADVDNSGTIDYIEFITATMHRHKLEREENLY
KAFQFFDKDNSGFITRDELRHAMSEYGMGDEATIDEILDDVDTNKDGLINYEEFVAMMRR
GIVDDHGGKLREN

Transcript Sequence

Gene sequence data has not been registered.